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Paul J. Berkman
Paul J. Berkman
Independent
Verified email at csiro.au - Homepage
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Cited by
Cited by
Year
The genome of the mesopolyploid crop species Brassica rapa
Brassica rapa Genome Sequencing Project Consortium, X Wang, H Wang, ...
Nature genetics 43 (10), 1035-1039, 2011
20942011
Next‐generation sequencing applications for wheat crop improvement
PJ Berkman, K Lai, MT Lorenc, D Edwards
American journal of botany 99 (2), 365-371, 2012
1482012
Sequencing and assembly of low copy and genic regions of isolated Triticum aestivum chromosome arm 7DS
PJ Berkman, A Skarshewski, MT Lorenc, K Lai, C Duran, EYS Ling, ...
Plant biotechnology journal 9 (7), 768-775, 2011
1362011
Single nucleotide polymorphism discovery from wheat next‐generation sequence data
K Lai, C Duran, PJ Berkman, MT Lorenc, J Stiller, S Manoli, MJ Hayden, ...
Plant biotechnology journal 10 (6), 743-749, 2012
1252012
Sequencing wheat chromosome arm 7BS delimits the 7BS/4AL translocation and reveals homoeologous gene conservation
PJ Berkman, A Skarshewski, S Manoli, MT Lorenc, J Stiller, L Smits, K Lai, ...
TAG Theoretical and Applied Genetics 123 (3), 423-432, 2012
1182012
Dispersion and domestication shaped the genome of bread wheat
PJ Berkman, P Visendi, HC Lee, J Stiller, S Manoli, MT Lorenc, K Lai, ...
Plant biotechnology journal 11 (5), 564-571, 2013
1052013
Complete Genome Sequence of Sporisorium scitamineum and Biotrophic Interaction Transcriptome with Sugarcane
LM Taniguti, PDC Schaker, J Benevenuto, LP Peters, G Carvalho, ...
PloS one 10 (6), e0129318, 2015
982015
The defence‐associated transcriptome of hexaploid wheat displays homoeolog expression and induction bias
JJ Powell, TL Fitzgerald, J Stiller, PJ Berkman, DM Gardiner, JM Manners, ...
Plant biotechnology journal 15 (4), 533-543, 2017
852017
Discovery of single nucleotide polymorphisms in complex genomes using SGSautoSNP
MT Lorenc, S Hayashi, J Stiller, H Lee, S Manoli, P Ruperao, P Visendi, ...
Biology 1 (2), 370-382, 2012
802012
WheatGenome. info: an integrated database and portal for wheat genome information
K Lai, PJ Berkman, MT Lorenc, C Duran, L Smits, S Manoli, J Stiller, ...
Plant and Cell Physiology 53 (2), e2-e2, 2012
672012
Sequence-based analysis of translocations and inversions in bread wheat (Triticum aestivum L.)
J Ma, J Stiller, PJ Berkman, Y Wei, J Rogers, C Feuillet, J Dolezel, ...
PloS one 8 (11), e79329, 2013
662013
Future tools for association mapping in crop plants
C Duran, D Eales, D Marshall, M Imelfort, J Stiller, PJ Berkman, T Clark, ...
Genome 53 (11), 1017-1023, 2010
592010
Identification and characterization of more than 4 million intervarietal SNP s across the group 7 chromosomes of bread wheat
K Lai, MT Lorenc, HC Lee, PJ Berkman, PE Bayer, P Visendi, P Ruperao, ...
Plant biotechnology journal 13 (1), 97-104, 2015
522015
Targeted identification of genomic regions using TAGdb
DJ Marshall, A Hayward, D Eales, M Imelfort, J Stiller, PJ Berkman, ...
Plant Methods 6, 1-6, 2010
452010
Analysis of the resistance mechanisms in sugarcane during Sporisorium scitamineum infection using RNA-seq and microscopy
MD McNeil, SA Bhuiyan, PJ Berkman, BJ Croft, KS Aitken
PLoS One 13 (5), e0197840, 2018
432018
Comparative mapping in the Poaceae family reveals translocations in the complex polyploid genome of sugarcane
KS Aitken, MD McNeil, PJ Berkman, S Hermann, A Kilian, PC Bundock, ...
BMC Plant Biology 14, 1-15, 2014
422014
Generation of a 345K sugarcane SNP chip
K Aitken, A Farmer, P Berkman, C Muller, X Wei, E Demano, P Jackson, ...
Proc. Aust. Soc. Sugar Cane Technol 29, 1165-1172, 2016
322016
An efficient approach to BAC based assembly of complex genomes
P Visendi, PJ Berkman, S Hayashi, AA Golicz, PE Bayer, P Ruperao, ...
Plant Methods 12, 1-9, 2016
172016
The first sugarcane genome assembly: how can we use it?
K Aitken, P Berkman, A Rae
162016
A Survey Sequence Comparison of Saccharum Genotypes Reveals Allelic Diversity Differences
PJ Berkman, PC Bundock, RE Casu, RJ Henry, AL Rae, KS Aitken
Tropical Plant Biology 7, 71-83, 2014
162014
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