Russell S Thomas
Russell S Thomas
Director, Center for Computational Toxicology and Exposure, U.S. Environmental Protection Agency
Verified email at epa.gov
Title
Cited by
Cited by
Year
The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
MaQC Consortium
Nature biotechnology 28 (8), 827, 2010
6842010
Portosystemic shunting and persistent fetal vascular structures in aryl hydrocarbon receptor-deficient mice
GP Lahvis, SL Lindell, RS Thomas, RS McCuskey, C Murphy, E Glover, ...
Proceedings of the National Academy of Sciences 97 (19), 10442-10447, 2000
4142000
Integration of dosimetry, exposure, and high-throughput screening data in chemical toxicity assessment
BA Wetmore, JF Wambaugh, SS Ferguson, MA Sochaski, DM Rotroff, ...
Toxicological Sciences 125 (1), 157-174, 2012
3142012
ToxCast chemical landscape: paving the road to 21st century toxicology
AM Richard, RS Judson, KA Houck, CM Grulke, P Volarath, ...
Chemical research in toxicology 29 (8), 1225-1251, 2016
2812016
Identification of toxicologically predictive gene sets using cDNA microarrays
RS Thomas, DR Rank, SG Penn, GM Zastrow, KR Hayes, K Pande, ...
Molecular Pharmacology 60 (6), 1189-1194, 2001
2732001
A comparison of batch effect removal methods for enhancement of prediction performance using MAQC-II microarray gene expression data
J Luo, M Schumacher, A Scherer, D Sanoudou, D Megherbi, T Davison, ...
The pharmacogenomics journal 10 (4), 278-291, 2010
2542010
Incorporating Human Dosimetry and Exposure into High-Throughput In Vitro Toxicity Screening
DM Rotroff, BA Wetmore, DJ Dix, SS Ferguson, HJ Clewell, KA Houck, ...
Toxicological Sciences 117 (2), 348-358, 2010
2192010
Incorporating new technologies into toxicity testing and risk assessment: moving from 21st century vision to a data-driven framework
RS Thomas, MA Philbert, SS Auerbach, BA Wetmore, MJ Devito, I Cote, ...
toxicological sciences 136 (1), 4-18, 2013
1922013
Integrated Model of Chemical Perturbations of a Biological Pathway Using 18 In Vitro High-Throughput Screening Assays for the Estrogen Receptor
RS Judson, FM Magpantay, V Chickarmane, C Haskell, N Tania, J Taylor, ...
Toxicological Sciences 148 (1), 137-154, 2015
1862015
Estimating toxicity-related biological pathway altering doses for high-throughput chemical risk assessment
RS Judson, RJ Kavlock, RW Setzer, EA Cohen Hubal, MT Martin, ...
Chemical research in toxicology 24 (4), 451-462, 2011
1852011
Screening chemicals for estrogen receptor bioactivity using a computational model
P Browne, RS Judson, WM Casey, NC Kleinstreuer, RS Thomas
Environmental science & technology 49 (14), 8804-8814, 2015
1722015
Incorporating High-Throughput Exposure Predictions With Dosimetry-Adjusted In Vitro Bioactivity to Inform Chemical Toxicity Testing
BA Wetmore, JF Wambaugh, B Allen, SS Ferguson, MA Sochaski, ...
Toxicological Sciences 148 (1), 121-136, 2015
1692015
A method to integrate benchmark dose estimates with genomic data to assess the functional effects of chemical exposure
RS Thomas, BC Allen, A Nong, L Yang, E Bermudez, HJ Clewell III, ...
Toxicological sciences 98 (1), 240-248, 2007
1522007
IVT-seq reveals extreme bias in RNA sequencing
NF Lahens, IH Kavakli, R Zhang, K Hayer, MB Black, H Dueck, A Pizarro, ...
Genome biology 15 (6), R86, 2014
1442014
BMDExpress: a software tool for the benchmark dose analyses of genomic data
L Yang, BC Allen, RS Thomas
BMC genomics 8 (1), 387, 2007
1402007
Editor's Highlight: Analysis of the Effects of Cell Stress and Cytotoxicity on In Vitro Assay Activity Across a Diverse Chemical and Assay Space
R Judson, K Houck, M Martin, AM Richard, TB Knudsen, I Shah, S Little, ...
Toxicological Sciences 152 (2), 323-339, 2016
1372016
A Comprehensive Statistical Analysis of Predicting In Vivo Hazard Using High-Throughput In Vitro Screening
RS Thomas, MB Black, L Li, E Healy, TM Chu, W Bao, ME Andersen, ...
Toxicological Sciences 128 (2), 398-417, 2012
1362012
Genome-wide analysis of human HSF1 signaling reveals a transcriptional program linked to cellular adaptation and survival
TJ Page, D Sikder, L Yang, L Pluta, RD Wolfinger, T Kodadek, ...
Molecular bioSystems 2 (12), 627-639, 2006
1352006
Activation of the aryl-hydrocarbon receptor inhibits invasive and metastatic features of human breast cancer cells and promotes breast cancer cell differentiation
JM Hall, MA Barhoover, D Kazmin, DP McDonnell, WF Greenlee, ...
Molecular endocrinology 24 (2), 359-369, 2010
1322010
Aryl hydrocarbon receptor regulates cell cycle progression in human breast cancer cells via a functional interaction with cyclin-dependent kinase 4
MA Barhoover, JM Hall, WF Greenlee, RS Thomas
Molecular pharmacology 77 (2), 195-201, 2010
1262010
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