MickaŽl Mendez
MickaŽl Mendez
Graduate Student, Department of Computer Science, University of Toronto
Verified email at mail.utoronto.ca
Title
Cited by
Cited by
Year
An atlas of human long non-coding RNAs with accurate 5′ ends
CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ...
Nature 543 (7644), 199-204, 2017
6822017
ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets
M Brozovic, C Dantec, J Dardaillon, D Dauga, E Faure, M Gineste, ...
Nucleic acids research 46 (D1), D718-D725, 2018
642018
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution
T Kouno, J Moody, ATJ Kwon, Y Shibayama, S Kato, Y Huang, M BŲttcher, ...
Nature communications 10 (1), 1-12, 2019
602019
ANISEED 2015: a digital framework for the comparative developmental biology of ascidians
M Brozovic, C Martin, C Dantec, D Dauga, M Mendez, P Simion, ...
Nucleic acids research 44 (D1), D808-D818, 2016
592016
Functional annotation of human long noncoding RNAs via molecular phenotyping
JA Ramilowski, CW Yip, S Agrawal, JC Chang, Y Ciani, IV Kulakovskiy, ...
Genome research 30 (7), 1060-1072, 2020
512020
Linking FANTOM5 CAGE peaks to annotations with CAGEscan
N Bertin, M Mendez, A Hasegawa, M Lizio, I Abugessaisa, J Severin, ...
Scientific data 4 (1), 1-8, 2017
92017
Unsupervised analysis of multi-experiment transcriptomic patterns with SegRNA identifies unannotated transcripts
M Mendez, MS Scott, MM Hoffman
bioRxiv, 2020
22020
Semi-automated genome annotation using epigenomic data and Segway
EG Roberts, M Mendez, C Viner, M Karimzadeh, RCW Chan, R Ancar, ...
bioRxiv, 080382, 2016
22016
Functional annotation of human long noncoding RNAs using chromatin conformation data
S Agrawal, T Alam, M Koido, IV Kulakovskiy, J Severin, I Abugessaisa, ...
bioRxiv, 2021
12021
Semi-supervised segmentation and genome annotation
RCW Chan, M McNeil, EG Roberts, M Mendez, MW Libbrecht, ...
bioRxiv, 2020
12020
System for turnkey analysis of semi-automated genome annotations
M Asenjo Ponce de Leůn
Universitat PolitŤcnica de Catalunya, 2018
2018
Large-scale unsupervised transcriptome annotation reveals candidate small RNAs from unannotated regions
M Mendez, MM Hoffman
HUMAN GENOMICS 12, 2018
2018
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Articles 1–12