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Vera Ruda
Vera Ruda
postdoctoral associate, MIT
Verified email at mit.edu
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Year
From noncoding variant to phenotype via SORT1 at the 1p13 cholesterol locus
K Musunuru, A Strong, M Frank-Kamenetsky, NE Lee, T Ahfeldt, KV Sachs, ...
Nature 466 (7307), 714-719, 2010
12332010
In vivo endothelial siRNA delivery using polymeric nanoparticles with low molecular weight
JE Dahlman, C Barnes, OF Khan, A Thiriot, S Jhunjunwala, TE Shaw, ...
Nature nanotechnology 9 (8), 648-655, 2014
6572014
Rab5 is necessary for the biogenesis of the endolysosomal system in vivo
A Zeigerer, J Gilleron, RL Bogorad, G Marsico, H Nonaka, S Seifert, ...
Nature 485 (7399), 465-470, 2012
3992012
Sustained antigen availability during germinal center initiation enhances antibody responses to vaccination
HH Tam, MB Melo, M Kang, JM Pelet, VM Ruda, MH Foley, JK Hu, ...
Proceedings of the National Academy of Sciences 113 (43), E6639-E6648, 2016
3552016
Silencing of lipid metabolism genes through IRE1α-mediated mRNA decay lowers plasma lipids in mice
JS So, KY Hur, M Tarrio, V Ruda, M Frank-Kamenetsky, K Fitzgerald, ...
Cell metabolism 16 (4), 487-499, 2012
2872012
Influence of Cationic Lipid Composition on Gene Silencing Properties of Lipid Nanoparticle Formulations of siRNA in Antigen-Presenting Cells
G Basha, TI Novobrantseva, N Rosin, YYC Tam, IM Hafez, MK Wong, ...
Molecular Therapy, 2011
2492011
Pervasive regulatory functions of mRNA structure revealed by high-resolution SHAPE probing
AM Mustoe, S Busan, GM Rice, CE Hajdin, BK Peterson, VM Ruda, ...
Cell 173 (1), 181-195. e18, 2018
2342018
Macrophages retain hematopoietic stem cells in the spleen via VCAM-1
P Dutta, FF Hoyer, LS Grigoryeva, HB Sager, F Leuschner, G Courties, ...
Journal of Experimental Medicine 212 (4), 497-512, 2015
1752015
IRE1α activation protects mice against acetaminophen-induced hepatotoxicity
KY Hur, JS So, V Ruda, M Frank-Kamenetsky, K Fitzgerald, V Koteliansky, ...
Journal of Experimental Medicine 209 (2), 307-318, 2012
1592012
Systemic RNAi-mediated gene silencing in nonhuman primate and rodent myeloid cells
TI Novobrantseva, A Borodovsky, J Wong, B Klebanov, M Zafari, K Yucius, ...
Molecular Therapy-Nucleic Acids 1, 2012
1382012
Imaging transcription in living cells
X Darzacq, J Yao, DR Larson, SZ Causse, L Bosanac, V De Turris, ...
Annual review of biophysics 38, 173-196, 2009
1332009
TGFβ-blockade uncovers stromal plasticity in tumors by revealing the existence of a subset of interferon-licensed fibroblasts
AL Grauel, B Nguyen, D Ruddy, T Laszewski, S Schwartz, J Chang, ...
Nature communications 11 (1), 6315, 2020
1202020
Nanoparticle-formulated siRNA targeting integrins inhibits hepatocellular carcinoma progression in mice
RL Bogorad, H Yin, A Zeigerer, H Nonaka, VM Ruda, M Zerial, ...
Nature communications 5 (1), 3869, 2014
872014
Tissue specificity of enhancer and promoter activities of a HERV-K (HML-2) LTR
VM Ruda, SB Akopov, DO Trubetskoy, NL Manuylov, AS Vetchinova, ...
Virus research 104 (1), 11-16, 2004
842004
Identification, genome mapping, and CTCF binding of potential insulators within the FXYD5-COX7A1 locus of human Chromosome 19q13.12
SB Akopov, VM Ruda, VV Batrak, AS Vetchinova, IP Chernov, ...
Mammalian genome 17, 1042-1049, 2006
272006
The roles of individual mammalian argonautes in RNA interference in vivo
VM Ruda, R Chandwani, A Sehgal, RL Bogorad, A Akinc, K Charisse, ...
PLoS One 9 (7), e101749, 2014
232014
Caffeine prevents transcription inhibition and P-TEFb/7SK dissociation following UV-induced DNA damage
G Napolitano, S Amente, V Castiglia, B Gargano, V Ruda, X Darzacq, ...
PLoS One 5 (6), e11245, 2010
162010
RNAi-nanoparticulate manipulation of gene expression as a new functional genomics tool in the liver
H Yin, RL Bogorad, C Barnes, S Walsh, I Zhuang, H Nonaka, V Ruda, ...
Journal of Hepatology 64 (4), 899-907, 2016
82016
Regulatory potential of S/MAR elements in transient expression
AV Sass, VM Ruda, SB Akopov, EV Snezhkov, LG Nikolaev, ED Sverdlov
Russian Journal of Bioorganic Chemistry 31, 70-73, 2005
72005
Control of liver size by RNAi-mediated multiplex knockdown and its application for discovery of regulatory mechanisms
H Yin, RL Bogorad, C Barnes, S Walsha, I Zhuang, H Nonaka, V Ruda, ...
Journal of hepatology 64 (4), 899, 2016
2016
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