Asger Hobolth

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Mikkel Heide SchierupProfessor, Bioinformatics Research Centre, Aarhus UniversityVerified email at birc.au.dk
Thomas MailundAssociate Professor of Bioinformatics, Aarhus UniversityVerified email at birc.au.dk
Julien Yann DutheilMax Planck Institute for Evolutionary BiologyVerified email at evolbio.mpg.de
Kasper MunchBioinformatics Research Centre, Aarhus UniversityVerified email at daimi.au.dk
Jakob Skou PedersenProfessor at Department of Molecular Medicine, Aarhus UniversityVerified email at ki.au.dk
Paula TataruSenior Bioinformatics Scientist, QiagenVerified email at qiagen.com
Thomas BataillonAssociate Professor, Bioinformatics Research Center , Aarhus UniversityVerified email at birc.au.dk
Lars Nørvang AndersenAssoc. Prof. Aarhus UniversityVerified email at math.au.dk
Morten Muhlig NielsenAssociate Professor of Bioinformatics, Aarhus University HospitalVerified email at clin.au.dk
Aylwyn ScallyUniversity of CambridgeVerified email at gen.cam.ac.uk
Gerton LunterAssociate Professor, University of OxfordVerified email at well.ox.ac.uk
Qianyun GuoAarhus UniversityVerified email at cs.au.dk
Marcy UyenoyamaDuke UniversityVerified email at duke.edu
Michał ŚwitnickiSenior Data ScientistVerified email at asseco.pl
laurits skovPostDoc, Max Planck Institute for Evolutionary Anthropology, LeipzigVerified email at eva.mpg.de
Jeffrey L. ThorneProfessor of Genetics and Statistics, North Carolina State UniversityVerified email at statgen.ncsu.edu
Richard DurbinDept of Genetics, University of CambridgeVerified email at cam.ac.uk
Carsten WiufUniversity of CopenhagenVerified email at math.ku.dk
Kay PrüferMax-Planck Institute for Evolutionary AnthropologyVerified email at eva.mpg.de
Michael WestergaardEindhoven Technical University (the Netherlands)Verified email at tue.nl

Asger Hobolth

Professor, Department of Mathematics, Aarhus University

Verified email at math.au.dk

bioinformatics machine learning probability theory statistics


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Great ape genetic diversity and population history J Prado-Martinez, PH Sudmant, JM Kidd, H Li, JL Kelley, ... Nature 499 (7459), 471-475, 2013	856	2013
Insights into hominid evolution from the gorilla genome sequence A Scally, JY Dutheil, LDW Hillier, GE Jordan, I Goodhead, J Herrero, ... Nature 483 (7388), 169-175, 2012	770	2012
Comparative and demographic analysis of orang-utan genomes DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ... Nature 469 (7331), 529-533, 2011	655	2011
The bonobo genome compared with the chimpanzee and human genomes K Prüfer, K Munch, I Hellmann, K Akagi, JR Miller, B Walenz, S Koren, ... Nature 486 (7404), 527-531, 2012	606	2012
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 578 (7793), 102-111, 2020	381	2020
Genomic relationships and speciation times of human, chimpanzee, and gorilla inferred from a coalescent hidden Markov model A Hobolth, OF Christensen, T Mailund, MH Schierup PLoS genetics 3 (2), e7, 2007	372	2007
Incomplete lineage sorting patterns among human, chimpanzee, and orangutan suggest recent orangutan speciation and widespread selection A Hobolth, JY Dutheil, J Hawks, MH Schierup, T Mailund Genome research 21 (3), 349-356, 2011	228	2011
Pan-cancer analysis of whole genomes T Hu, Y Kumar, EZ Ma, Z Wu, H Xue Nature, 2020	157	2020
A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species T Mailund, AE Halager, M Westergaard, JY Dutheil, K Munch, ... PLoS genetics 8 (12), e1003125, 2012	115	2012
Ancestral population genomics: the coalescent hidden Markov model approach JY Dutheil, G Ganapathy, A Hobolth, T Mailund, MK Uyenoyama, ... Genetics 183 (1), 259-274, 2009	115	2009
Estimating divergence time and ancestral effective population size of Bornean and Sumatran orangutan subspecies using a coalescent hidden Markov model T Mailund, JY Dutheil, A Hobolth, G Lunter, MH Schierup PLoS genetics 7 (3), e1001319, 2011	106	2011
Simulation from endpoint-conditioned, continuous-time Markov chains on a finite state space, with applications to molecular evolution A Hobolth, EA Stone The annals of applied statistics 3 (3), 1204, 2009	99	2009
Extensive X-linked adaptive evolution in central chimpanzees C Hvilsom, Y Qian, T Bataillon, Y Li, T Mailund, B Sallé, F Carlsen, R Li, ... Proceedings of the National Academy of Sciences 109 (6), 2054-2059, 2012	96	2012
Comparative analysis of protein coding sequences from human, mouse and the domesticated pig FG Jørgensen, A Hobolth, H Hornshøj, C Bendixen, M Fredholm, ... BMC biology 3, 1-15, 2005	76	2005
Extreme selective sweeps independently targeted the X chromosomes of the great apes K Nam, K Munch, A Hobolth, JY Dutheil, KR Veeramah, AE Woerner, ... Proceedings of the National Academy of Sciences 112 (20), 6413-6418, 2015	74	2015
Quantifying the impact of protein tertiary structure on molecular evolution SC Choi, A Hobolth, DM Robinson, H Kishino, JL Thorne Molecular biology and evolution 24 (8), 1769-1782, 2007	70	2007
Statistical inference in evolutionary models of DNA sequences via the EM algorithm A Hobolth, JL Jensen Statistical applications in genetics and molecular biology 4 (1), 2005	67	2005
Detecting archaic introgression using an unadmixed outgroup L Skov, R Hui, V Shchur, A Hobolth, A Scally, MH Schierup, R Durbin PLoS Genetics 14 (9), e1007641, 2018	63	2018
Rates and patterns of great ape retrotransposition F Hormozdiari, MK Konkel, J Prado-Martinez, G Chiatante, IH Herraez, ... Proceedings of the national academy of sciences 110 (33), 13457-13462, 2013	61	2013
Statistical inference in the Wright–Fisher model using allele frequency data P Tataru, M Simonsen, T Bataillon, A Hobolth Systematic biology 66 (1), e30-e46, 2017	60	2017

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