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Jacob Biesinger
Jacob Biesinger
University of California Irvine, Brigham Young University
Verified email at uci.edu
Title
Cited by
Cited by
Year
Biallelic genome modification in F0 Xenopus tropicalis embryos using the CRISPR/Cas system
IL Blitz, J Biesinger, X Xie, KWY Cho
genesis 51 (12), 827-834, 2013
2112013
Transcriptome-wide analyses of CstF64–RNA interactions in global regulation of mRNA alternative polyadenylation
C Yao, J Biesinger, J Wan, L Weng, Y Xing, X Xie, Y Shi
Proceedings of the National Academy of Sciences 109 (46), 18773-18778, 2012
2102012
Genome-wide localization of SREBP-2 in hepatic chromatin predicts a role in autophagy
YK Seo, TI Jeon, HK Chong, J Biesinger, X Xie, TF Osborne
Cell metabolism 13 (4), 367-375, 2011
1802011
A risk variant in an miR-125b binding site in BMPR1B is associated with breast cancer pathogenesis
P Saetrom, J Biesinger, SM Li, D Smith, LF Thomas, K Majzoub, GE Rivas, ...
Cancer research 69 (18), 7459-7465, 2009
1672009
Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program
WT Chiu, R Charney Le, IL Blitz, MB Fish, Y Li, J Biesinger, X Xie, ...
Development 141 (23), 4537-4547, 2014
792014
Genome-wide analysis of hepatic LRH-1 reveals a promoter binding preference and suggests a role in regulating genes of lipid metabolism in concert with FXR
HK Chong, J Biesinger, YK Seo, X Xie, TF Osborne
BMC genomics 13, 1-11, 2012
622012
Discovering and mapping chromatin states using a tree hidden Markov model
J Biesinger, Y Wang, X Xie
BMC bioinformatics 14, 1-11, 2013
552013
Integrative ChIP-seq/microarray analysis identifies a CTNNB1 target signature enriched in intestinal stem cells and colon cancer
K Watanabe, J Biesinger, ML Salmans, BS Roberts, WT Arthur, M Cleary, ...
PloS one 9 (3), e92317, 2014
542014
The effect of Nipped-B-like (Nipbl) haploinsufficiency on genome-wide cohesin binding and target gene expression: modeling Cornelia de Lange syndrome
DA Newkirk, YY Chen, R Chien, W Zeng, J Biesinger, E Flowers, ...
Clinical epigenetics 9, 1-20, 2017
452017
AREM: aligning short reads from ChIP-sequencing by expectation maximization
D Newkirk, J Biesinger, A Chon, K Yokomori, X Xie
Journal of Computational Biology 18 (11), 1495-1505, 2011
442011
Integrative ChIP-seq
K Watanabe, J Biesinger, ML Salmans, BS Roberts, WT Arthur
Microarray Analysis Identifies a CTNNB1 Target Signature, 2014
2014
Combined biological and computational approaches to understand the role of Get1/Grhl3 in epidermal differentiation
RP Herndon, A Bhandari, D Dizon, R Chadwick, J Biesinger, X Xie, ...
JOURNAL OF INVESTIGATIVE DERMATOLOGY 131, S61-S61, 2011
2011
Genome‐wide Localization of SREBP‐2 in Mouse Liver‐Chromatin by ChIP‐seq
Y Seo, HK Chong, J Biesinger, X Xie, TI Jeon, TF Osborne
The FASEB Journal 24, lb112-lb112, 2010
2010
The effect of Nipped-B-like (Nipbl) haploinsufficiency on genome-wide cohesin binding and
DA Newkirk, YY Chen, R Chien, W Zeng, J Biesinger, E Flowers, ...
Additional file 1: supplemental material for discovering and mapping chromatin states using a tree hidden Markov model
J Biesinger, Y Wang, X Xie
Solving Generalized FLSA with ADMM Algorithm for Copy Number Variation Detection in Human Genomes
J Biesinger, Y Chen
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