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Eric Strobel
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Cotranscriptional folding of a riboswitch at nucleotide resolution
KE Watters, EJ Strobel, AM Yu, JT Lis, JB Lucks
Nature structural & molecular biology 23 (12), 1124-1131, 2016
1342016
High-throughput determination of RNA structures
EJ Strobel, AM Yu, JB Lucks
Nature Reviews Genetics 19 (10), 615-634, 2018
1172018
Characterizing RNA structures in vitro and in vivo with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)
KE Watters, MY Angela, EJ Strobel, AH Settle, JB Lucks
Methods 103, 34-48, 2016
792016
RNA systems biology: uniting functional discoveries and structural tools to understand global roles of RNAs
EJ Strobel, KE Watters, D Loughrey, JB Lucks
Current opinion in biotechnology 39, 182-191, 2016
532016
Distributed biotin–streptavidin transcription roadblocks for mapping cotranscriptional RNA folding
EJ Strobel, KE Watters, Y Nedialkov, I Artsimovitch, JB Lucks
Nucleic acids research 45 (12), e109-e109, 2017
322017
Two transcription pause elements underlie a σ70-dependent pause cycle
EJ Strobel, JW Roberts
Proceedings of the National Academy of Sciences 112 (32), E4374-E4380, 2015
322015
A ligand-gated strand displacement mechanism for ZTP riboswitch transcription control
EJ Strobel, L Cheng, KE Berman, PD Carlson, JB Lucks
Nature chemical biology 15 (11), 1067-1076, 2019
312019
Regulation of promoter-proximal transcription elongation: Enhanced DNA scrunching drives λQ antiterminator-dependent escape from a σ70-dependent pause
EJ Strobel, JW Roberts
Nucleic Acids Research 42 (8), 5097-5108, 2014
222014
SnapShot: RNA structure probing technologies
PD Carlson, ME Evans, MY Angela, EJ Strobel, JB Lucks
Cell 175 (2), 600-600. e1, 2018
122018
A universal transcription pause sequence is an element of initiation factor σ70-dependent pausing
JG Bird, EJ Strobel, JW Roberts
Nucleic acids research 44 (14), 6732-6740, 2016
102016
Chemical roadblocking of DNA transcription for nascent RNA display
EJ Strobel, JT Lis, JB Lucks
Journal of Biological Chemistry 295 (19), 6401-6412, 2020
92020
Computationally reconstructing cotranscriptional RNA folding pathways from experimental data reveals rearrangement of non-native folding intermediates
MY Angela, PM Gasper, EJ Strobel, KE Watters, AA Chen, JB Lucks
bioRxiv, 379222, 2018
92018
Preparation of E. coli RNA polymerase transcription elongation complexes by selective photoelution from magnetic beads
EJ Strobel
Journal of Biological Chemistry 297 (1), 2021
62021
Preparation and Characterization of Internally Modified DNA Templates for Chemical Transcription Roadblocking
EJ Strobel
Bio-protocol 11 (17), 2021
22021
Purification of synchronized Escherichia coli transcription elongation complexes by reversible immobilization on magnetic beads
SL Kelly, CE Szyjka, EJ Strobel
Journal of Biological Chemistry 298 (4), 2022
12022
Efficient linear dsDNA tagging using deoxyuridine excision
EJ Strobel
ChemBioChem 22 (22), 3214-3224, 2021
12021
Isolation of synchronized E. coli elongation complexes for solid-phase and solution-based in vitro transcription assays
EJ Strobel, SL Kelly, CE Szyjka
Academic Press, 2022
2022
Cotranscriptional RNA Chemical Probing
CE Szyjka, EJ Strobel
Riboregulator Design and Analysis, 291-330, 2022
2022
Mechanism Of Sigma-Dependent Pausing In Regulation Of The Bacteriophage Lambda Late Gene Operon
E Strobel
Cornell University, 2015
2015
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Articles 1–19