Jonathan Badger
Jonathan Badger
Staff Scientist, National Cancer Institute
Verified email at nih.gov - Homepage
TitleCited byYear
Structure, function and diversity of the healthy human microbiome
Human Microbiome Project Consortium
Nature 486 (7402), 207-14, 2012
4607*2012
Corrections: The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
HP Klenk, RA Clayton, JF Tomb, O White, KE Nelson, KA Ketchum, ...
Nature 394 (6688), 101, 1998
15581998
The Phaeodactylum genome reveals the evolutionary history of diatom genomes
C Bowler, AE Allen, JH Badger, J Grimwood, K Jabbari, A Kuo, ...
Nature 456 (7219), 239, 2008
12742008
A framework for human microbiome research
Human Microbiome Consortium
Nature. E-pub ahead of print. doi 10, 2012
1271*2012
Comparative genomics of trypanosomatid parasitic protozoa
NM El-Sayed, PJ Myler, G Blandin, M Berriman, J Crabtree, G Aggarwal, ...
Science 309 (5733), 404-409, 2005
8002005
The Ectocarpus genome and the independent evolution of multicellularity in brown algae
JM Cock, L Sterck, P Rouzé, D Scornet, AE Allen, G Amoutzias, ...
Nature 465 (7298), 617, 2010
6872010
Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote
JA Eisen, RS Coyne, M Wu, D Wu, M Thiagarajan, JR Wortman, ...
PLoS biology 4 (9), e286, 2006
6672006
An information-based sequence distance and its application to whole mitochondrial genome phylogeny
M Li, JH Badger, X Chen, S Kwong, P Kearney, H Zhang
Bioinformatics 17 (2), 149-154, 2001
6122001
Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species
DE Fouts, EF Mongodin, RE Mandrell, WG Miller, DA Rasko, J Ravel, ...
PLoS biology 3 (1), e15, 2005
5712005
Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils
NL Ward, JF Challacombe, PH Janssen, B Henrissat, PM Coutinho, M Wu, ...
Appl. Environ. Microbiol. 75 (7), 2046-2056, 2009
5592009
A catalog of reference genomes from the human microbiome.
KE Nelson, GM Weinstock, SK Highlander, KC Worley, HH Creasy, ...
Science (New York, NY) 328 (5981), 994-999, 2010
5332010
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas
AZ Worden, JH Lee, T Mock, P Rouzé, MP Simmons, AL Aerts, AE Allen, ...
Science 324 (5924), 268-272, 2009
5292009
CRITICA: coding region identification tool invoking comparative analysis.
JH Badger, GJ Olsen
Molecular biology and evolution 16 (4), 512-524, 1999
4461999
Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus
ND Fedorova, N Khaldi, VS Joardar, R Maiti, P Amedeo, MJ Anderson, ...
PLoS genetics 4 (4), e1000046, 2008
4392008
Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum
MA Van Den Berg, R Albang, K Albermann, JH Badger, JM Daran, ...
Nature biotechnology 26 (10), 1161, 2008
4022008
Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species
PJ Haney, JH Badger, GL Buldak, CI Reich, CR Woese, GJ Olsen
Proceedings of the National Academy of Sciences 96 (7), 3578-3583, 1999
3521999
Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice
DE Fouts, HL Tyler, RT DeBoy, S Daugherty, Q Ren, JH Badger, ...
PLoS genetics 4 (7), e1000141, 2008
2532008
The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity
N Ziemert, S Podell, K Penn, JH Badger, E Allen, PR Jensen
PloS one 7 (3), e34064, 2012
2422012
Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment
B Palenik, Q Ren, CL Dupont, GS Myers, JF Heidelberg, JH Badger, ...
Proceedings of the National Academy of Sciences 103 (36), 13555-13559, 2006
2292006
The complete genome sequence of Haloferax volcanii DS2, a model archaeon
AL Hartman, C Norais, JH Badger, S Delmas, S Haldenby, R Madupu, ...
PloS one 5 (3), e9605, 2010
2092010
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Articles 1–20