Broňa Brejová
Broňa Brejová
Dept. of Computer Science, Comenius University in Bratislava, Slovakia
Verified email at fmph.uniba.sk - Homepage
TitleCited byYear
Comparative and demographic analysis of orang-utan genomes
DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ...
Nature 469 (7331), 529, 2011
4982011
The Schistosoma japonicum genome reveals features of host-parasite interplay
Y Zhou, H Zheng, X Chen, L Zhang, K Wang, J Guo, Z Huang, B Zhang, ...
Nature 460 (7253), 345, 2009
4042009
The genome of the hydatid tapeworm Echinococcus granulosus
H Zheng, W Zhang, L Zhang, Z Zhang, J Li, G Lu, Y Zhu, Y Wang, ...
Nature genetics 45 (10), 1168, 2013
1852013
The common marmoset genome provides insight into primate biology and evolution
TMG Sequencing, KC Worley, WC Warren, J Rogers, D Locke, DM Muzny, ...
Nature genetics 46 (8), 850, 2014
1202014
The completion of the mammalian gene collection (MGC)
G Temple, DS Gerhard, R Rasooly, EA Feingold, PJ Good, C Robinson, ...
Genome research 19 (12), 2324-2333, 2009
1002009
DeepNano: deep recurrent neural networks for base calling in MinION nanopore reads
V Boža, B Brejová, T Vinař
PloS one 12 (6), e0178751, 2017
952017
Optimal spaced seeds for homologous coding regions
B BREJOVÁ, DG Brown, T VINAŘ
Journal of Bioinformatics and Computational Biology 1 (04), 595-610, 2004
812004
Vector seeds: An extension to spaced seeds
B Brejová, DG Brown, T Vinař
Journal of Computer and System Sciences 70 (3), 364-380, 2005
672005
Finding patterns in biological sequences
B Brejová, C DiMarco, T Vinar, SR Hidalgo, G Holguin, C Patten
Unpublished project report for CS798G, University of Waterloo, Fall, 2000
662000
ExonHunter: a comprehensive approach to gene finding
B Brejová, DG Brown, M Li, T Vinař
Bioinformatics 21 (suppl_1), i57-i65, 2005
652005
Evolution of linear chromosomes and multipartite genomes in yeast mitochondria
M Valach, Z Farkas, D Fricova, J Kovac, B Brejova, T Vinar, I Pfeiffer, ...
Nucleic acids research 39 (10), 4202-4219, 2011
572011
Targeted discovery of novel human exons by comparative genomics
A Siepel, M Diekhans, B Brejová, L Langton, M Stevens, CLG Comstock, ...
Genome research 17 (12), 1763-1773, 2007
552007
Vector seeds: an extension to spaced seeds allows substantial improvements in sensitivity and specificity
B Brejová, DG Brown, T Vinař
International Workshop on Algorithms in Bioinformatics, 39-54, 2003
542003
Massive programmed translational jumping in mitochondria
BF Lang, M Jakubkova, E Hegedusova, R Daoud, L Forget, B Brejova, ...
Proceedings of the National Academy of Sciences 111 (16), 5926-5931, 2014
472014
Optimal arrangement of leaves in the tree representing hierarchical clustering of gene expression data
T Biedl, B Brejová, ED Demaine, AM Hamel, T Vinar
University of Waterloo, Canada, 2001
432001
Optimal spaced seeds for Hidden Markov Models, with application to homologous coding regions
B Brejová, DG Brown, T Vinař
Annual Symposium on Combinatorial Pattern Matching, 42-54, 2003
342003
Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution
S Zhu, YZ Cao, C Jiang, BY Tan, Z Wang, S Feng, L Zhang, XH Su, ...
BMC genomics 13 (1), 382, 2012
322012
On-line Viterbi algorithm for analysis of long biological sequences
R Šrámek, B Brejová, T Vinař
International Workshop on Algorithms in Bioinformatics, 240-251, 2007
31*2007
The most probable annotation problem in HMMs and its application to bioinformatics
B Brejová, DG Brown, T Vinař
Journal of Computer and System Sciences 73 (7), 1060-1077, 2007
282007
Analyzing variants of Shellsort
B Brejová
Information Processing Letters 79 (5), 223-227, 2001
242001
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Articles 1–20