Similarity search for scientific workflows J Starlinger, B Brancotte, S Cohen-Boulakia, U Leser Proceedings of the VLDB Endowment (PVLDB) 7 (12), 1143-1154, 2014 | 50 | 2014 |
Rank aggregation with ties: Experiments and analysis B Brancotte, B Yang, G Blin, S Cohen-Boulakia, A Denise, S Hamel Proceedings of the VLDB Endowment (PVLDB) 8 (11), 1202-1213, 2015 | 27 | 2015 |
Gene List significance at-a-glance with GeneValorization B Brancotte, A Biton, I Bernard-Pierrot, F Radvanyi, F Reyal, ... Bioinformatics 27 (8), 1187-1189, 2011 | 11 | 2011 |
Community curation of bioinformatics software and data resources J Ison, H Ménager, B Brancotte, E Jaaniso, A Salumets, T Raček, ... Briefings in bioinformatics 21 (5), 1697-1705, 2020 | 7 | 2020 |
Conqur-bio: Consensus ranking with query reformulation for biological data B Brancotte, B Rance, A Denise, S Cohen-Boulakia International Conference on Data Integration in the Life Sciences, 128-142, 2014 | 7 | 2014 |
A reusable tree-based web-visualization to browse EDAM ontology, and contribute to it. B Brancotte, C Blanchet, H Ménager Journal of Open Source Software 3 (27), 698, 2018 | 2 | 2018 |
Agrégation de classements avec égalités: algorithmes, guides à l'utilisateur et applications aux données biologiques B Brancotte Paris 11, 2015 | 1 | 2015 |
Viral Host Range database, an online tool for recording, analyzing and disseminating virus-host interactions Q Lamy-Besnier, B Brancotte, H Ménager, L Debarbieux Bioinformatics (Oxford, England), btab070, 2021 | | 2021 |
The iPPI-DB initiative: A Community-centered database of Protein-Protein Interaction modulators R Torchet, K Druart, LC Ruano, A Moine-Franel, H Borges, ... Bioinformatics, 2021 | | 2021 |
Reliability-aware and graph-based approach for rank aggregation of biological data P Andrieu, B Brancotte, L Bulteau, S Cohen-Boulakia, A Denise, A Pierrot, ... 2019 15th International Conference on eScience (eScience), 136-145, 2019 | | 2019 |
Redesign of iPPI-DB, a database for modulators of Protein-Protein Interactions R Torchet, A Moine-Franel, H Borges, B Brancotte, O Doppelt-Azeroual, ... JOBIM (Journées Ouvertes Biologie, Informatique et Mathématiques), 2019 | | 2019 |
Bioconvert: a collaborative bioinformatics format converter library T Cokelaer, A Biton, B Brancotte, Y Dufresne, KH Hillion, E Kornobis, ... F1000Research 7, 2018 | | 2018 |
Insyght: Analyse evolutionary conserved CDS, orthologs, syntenies, pan-genome, fusion, etc., for your bacteria of interest T Lacroix, V Loux, J Lorenzo, B Brancotte, C Blanchet, JF Gibrat Annual Research in Computational Molecular Biology (RECOMB), 2018 | | 2018 |
Multi-Cloud deployment for microbial genomes analysis J Lorenzo, B Brancotte, T Lacroix, M Bedri, JF Gibrat, C Blanchet JOBIM 2017-Journées Ouvertes Biologie Informatique Mathématiques, 234, 2017 | | 2017 |
Computing cluster with virtual machines in bioinformatics J Lorenzo, S Perrin, AS Ngaïlo, B Brancotte, M Bedri, C Blanchet, ... F1000Research 6, 2017 | | 2017 |
Cloud-based automated deployment of applications and infrastructures to provide turnkey appliances for reusable bioinformatic applications S Perrin, J Lorenzo, B Brancotte, JF Gibrat, C Blanchet F1000Research 6, 2017 | | 2017 |
Interrogation de bases de données biologiques publiques par reformulation de requêtes et classement des résultats avec ConQuR-Bio B Brancotte, B Rance, A Denise, S Cohen-Boulakia JOBIM (Journées Ouvertes Biologie Informatique Mathématiques), 2015 | | 2015 |
DevOps bioinformatics services with Docker, GitLab CI, and Kubernetes B Brancotte, T Menard, H Menager | | |