| Experimental and real-world evidence supporting the computational repurposing of bumetanide for APOE4-related Alzheimer’s disease A Taubes, P Nova, KA Zalocusky, I Kosti, M Bicak, MY Zilberter, Y Hao, ... Nature Aging 1 (10), 932-947, 2021 | 71 | 2021 |
| Transcription factor protein interactomes reveal genetic determinants in heart disease B Gonzalez-Teran, M Pittman, F Felix, R Thomas, D Richmond-Buccola, ... Cell 185 (5), 794-814. e30, 2022 | 44 | 2022 |
| Comparative and integrative analysis of RNA structural profiling data: current practices and emerging questions K Choudhary, F Deng, S Aviran Quantitative Biology, 1-22, 2017 | 42 | 2017 |
| Transient cell cycle induction in cardiomyocytes to treat subacute ischemic heart failure RRE Abouleisa, ABM Salama, Q Ou, XL Tang, M Solanki, Y Guo, Y Nong, ... Circulation 145 (17), 1339-1355, 2022 | 35 | 2022 |
| Stability and nuclear localization of yeast telomerase depend on protein components of RNase P/MRP PD Garcia, RW Leach, GM Wadsworth, K Choudhary, H Li, S Aviran, ... Nature communications 11 (1), 2173, 2020 | 34 | 2020 |
| Probing of RNA structures in a positive sense RNA virus reveals selection pressures for structural elements KE Watters, K Choudhary, S Aviran, JB Lucks, KL Perry, JR Thompson Nucleic acids research 46 (5), 2573-2584, 2018 | 26 | 2018 |
| Genome-wide discovery of DEAD-box RNA helicase targets reveals RNA structural remodeling in transcription termination YH Lai, K Choudhary, SC Cloutier, Z Xing, S Aviran, EJ Tran Genetics 212 (1), 153-174, 2019 | 25 | 2019 |
| Metrics for rapid quality control in RNA structure probing experiments K Choudhary, NP Shih, F Deng, M Ledda, B Li, S Aviran Bioinformatics 32 (23), 3575-3583, 2016 | 19 | 2016 |
| dStruct: identifying differentially reactive regions from RNA structurome profiling data K Choudhary, YH Lai, EJ Tran, S Aviran Genome biology 20, 1-26, 2019 | 16 | 2019 |
| Re-programming DNA-binding specificity in zinc finger proteins for targeting unique address in a genome A Grover*, A Pande*, K Choudhary*, K Gupta*, D Sundar Systems and synthetic biology 4 (4), 323-329, 2010 | 15 | 2010 |
| Protein Distributions from a Stochastic Model of the lac Operon of E. coli with DNA Looping: Analytical solution and comparison with experiments K Choudhary, S Oehler, A Narang PLoS One 9 (7), e102580, 2014 | 13 | 2014 |
| Transcription Factor GATA4 Regulates Cell Type–Specific Splicing Through Direct Interaction With RNA in Human Induced Pluripotent Stem Cell–Derived Cardiac Progenitors L Zhu, K Choudhary, B Gonzalez-Teran, YS Ang, R Thomas, NR Stone, ... Circulation, CIRCULATIONAHA. 121.057620, 2022 | 11 | 2022 |
| SEQualyzer: interactive tool for quality control and exploratory analysis of high-throughput RNA structural profiling data K Choudhary, L Ruan, F Deng, N Shih, S Aviran Bioinformatics 33 (3), 441-443, 2017 | 10 | 2017 |
| Phenotypic Differences between the Alzheimer’s Disease-Related hAPP-J20 Model and Heterozygous Zbtb20 Knock-Out Mice DR Gulbranson, K Ho, GQ Yu, X Yu, M Das, E Shao, D Kim, WJ Zhang, ... Eneuro 8 (3), 2021 | 9 | 2021 |
| Analytical Expressions and Physics for Single-Cell mRNA Distributions of the lac Operon of E. coli K Choudhary, A Narang Biophysical journal 117 (3), 572-586, 2019 | 7 | 2019 |
| scNetViz: from single cells to networks using Cytoscape K Choudhary, EC Meng, JJ Diaz-Mejia, GD Bader, AR Pico, JH Morris F1000Research 10, 2021 | 2 | 2021 |
| Urn models for stochastic gene expression yield intuitive insights into the probability distributions of single-cell mRNA and protein counts K Choudhary, A Narang Physical Biology 17 (6), 066001, 2020 | 2 | 2020 |
| A Mesp1-dependent developmental breakpoint in transcriptional and epigenomic specification of early cardiac precursors AL Krup, SAB Winchester, SS Ranade, A Agrawal, WP Devine, T Sinha, ... Development 150 (9), dev201229, 2023 | 1 | 2023 |
| Addition formulas for the and generalized hypergeometric functions with arbitrary parameters and their Kummer- and Euler-type transformations K Choudhary arXiv preprint arXiv:2001.03815, 2020 | 1 | 2020 |
| Introducing R as a smart version of calculators enables beginners to explore it on their own K Choudhary, AR Pico F1000Research 10, 2021 | | 2021 |
Sharon AviranAssociate Professor at UC DavisVerified email at ucdavis.edu
