| 4mCPred: machine learning methods for DNA N4-methylcytosine sites prediction W He, C Jia, Q Zou Bioinformatics 35 (4), 593-601, 2019 | 148 | 2019 |
| EnhancerPred: a predictor for discovering enhancers based on the combination and selection of multiple features C Jia, W He Scientific reports 6 (1), 38741, 2016 | 86 | 2016 |
| 70ProPred: a predictor for discovering sigma70 promoters based on combining multiple features W He, C Jia, Y Duan, Q Zou BMC systems biology 12, 99-107, 2018 | 84 | 2018 |
| A comprehensive overview and critical evaluation of gene regulatory network inference technologies M Zhao, W He, J Tang, Q Zou, F Guo Briefings in bioinformatics 22 (5), bbab009, 2021 | 56 | 2021 |
| Research progress in protein posttranslational modification site prediction W He, L Wei, Q Zou Briefings in functional genomics 18 (4), 220-229, 2019 | 49 | 2019 |
| EnhancerPred2. 0: predicting enhancers and their strength based on position-specific trinucleotide propensity and electron–ion interaction potential feature selection W He, C Jia Molecular Biosystems 13 (4), 767-774, 2017 | 48 | 2017 |
| Identification of highest-affinity binding sites of yeast transcription factor families Z Wang, W He, J Tang, F Guo Journal of chemical information and modeling 60 (3), 1876-1883, 2020 | 31 | 2020 |
| A hybrid deep learning framework for gene regulatory network inference from single-cell transcriptomic data M Zhao, W He, J Tang, Q Zou, F Guo Briefings in bioinformatics 23 (2), bbab568, 2022 | 28 | 2022 |
| Laplacian Regularized Sparse Representation Based Classifier for Identifying DNA N4-Methylcytosine Sites via -Matrix Norm Y Ding, W He, J Tang, Q Zou, F Guo IEEE/ACM Transactions on Computational Biology and Bioinformatics 20 (1 …, 2021 | 25 | 2021 |
| Sc-ncdnapred: a sequence-based predictor for identifying non-coding dna in saccharomyces cerevisiae W He, Y Ju, X Zeng, X Liu, Q Zou Frontiers in microbiology 9, 415541, 2018 | 19 | 2018 |
| OH-PRED: prediction of protein hydroxylation sites by incorporating adapted normal distribution bi-profile Bayes feature extraction and physicochemical properties of amino acids CZ Jia, WY He, YH Yao Journal of Biomolecular Structure and Dynamics 35 (4), 829-835, 2017 | 16 | 2017 |
| Ienhancer-kl: a novel two-layer predictor for identifying enhancers by position specific of nucleotide composition Y Lyu, Z Zhang, J Li, W He, Y Ding, F Guo IEEE/ACM Transactions on Computational Biology and Bioinformatics 18 (6 …, 2021 | 12 | 2021 |
| MMFGRN: a multi-source multi-model fusion method for gene regulatory network reconstruction W He, J Tang, Q Zou, F Guo Briefings in Bioinformatics 22 (6), bbab166, 2021 | 11 | 2021 |
| iPro2L-PSTKNC: a two-layer predictor for discovering various types of promoters by position specific of nucleotide composition Y Lyu, W He, S Li, Q Zou, F Guo IEEE Journal of Biomedical and Health Informatics 25 (6), 2329-2337, 2020 | 9 | 2020 |
| DephosSitePred: a high accuracy predictor for protein dephosphorylation sites C Jia, W He, Q Zou Combinatorial Chemistry & High Throughput Screening 20 (2), 153-157, 2017 | 8 | 2017 |
| Special protein molecules computational identification Q Zou, W He International Journal of Molecular Sciences 19 (2), 536, 2018 | 5 | 2018 |
| CarSitePred: an integrated algorithm for identifying carbonylated sites based on KNDUA-LNDOT resampling technique Y Zuo, J Zhang, W He, X Liu, Z Deng Journal of Biomolecular Structure and Dynamics, 1-13, 2024 | | 2024 |
| 4mCPred: machine learning methods for DNA N⁴-methylcytosine sites prediction W He, C Jia, Q Zou, J Hancock | | 2019 |
