Angela M Yu
Angela M Yu
Verified email at
Cited by
Cited by
Cotranscriptional folding of a riboswitch at nucleotide resolution
KE Watters, EJ Strobel, AM Yu, JT Lis, JB Lucks
Nature structural & molecular biology 23 (12), 1124-1131, 2016
High-throughput determination of RNA structures
EJ Strobel, AM Yu, JB Lucks
Nature Reviews Genetics 19 (10), 615-634, 2018
The SLE transcriptome exhibits evidence of chronic endotoxin exposure and has widespread dysregulation of non-coding and coding RNAs
L Shi, Z Zhang, AM Yu, W Wang, Z Wei, E Akhter, K Maurer, PC Reis, ...
PloS one 9 (5), e93846, 2014
Characterizing RNA structures in vitro and in vivo with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)
KE Watters, MY Angela, EJ Strobel, AH Settle, JB Lucks
Methods 103, 34-48, 2016
Nanopore sequencing in microgravity
ABR McIntyre, L Rizzardi, AM Yu, N Alexander, GL Rosen, DJ Botkin, ...
npj Microgravity 2 (1), 1-9, 2016
Computationally reconstructing cotranscriptional RNA folding from experimental data reveals rearrangement of non-native folding intermediates
MY Angela, PM Gasper, L Cheng, LB Lai, S Kaur, V Gopalan, AA Chen, ...
Molecular cell 81 (4), 870-883. e10, 2021
SnapShot: RNA structure probing technologies
PD Carlson, ME Evans, MY Angela, EJ Strobel, JB Lucks
Cell 175 (2), 600-600. e1, 2018
Cotranscriptional RNA strand exchange underlies the gene regulation mechanism in a purine-sensing transcriptional riboswitch
L Cheng, EN White, NL Brandt, AM Yu, AA Chen, JB Lucks
Nucleic acids research 50 (21), 12001-12018, 2022
Estimating RNA structure chemical probing reactivities from reverse transcriptase stops and mutations
AM Yu, ME Evans, JB Lucks
BioRxiv, 292532, 2018
Tracking RNA structures as RNAs transit through the cell
AM Yu, JB Lucks
Nature Structural & Molecular Biology 26 (4), 256-257, 2019
Nanopore sequencing in microgravity. NPJ Microgravity. 2016; 2: 16035
ABR McIntyre, L Rizzardi, AM Yu, N Alexander, GL Rosen, DJ Botkin
DUETT quantitatively identifies known and novel events in nascent RNA structural dynamics from chemical probing data
AY Xue, AM Yu, JB Lucks, N Bagheri
Bioinformatics 35 (24), 5103-5112, 2019
Efficient digest of high-throughput sequencing data in a reproducible report
Z Zhang, J Leipzig, A Sasson, AM Yu, JC Perin, HM Xie, M Sarmady, ...
BMC bioinformatics 14 (11), 1-10, 2013
The anti-cancer compound JTE-607 reveals hidden sequence specificity of the mRNA 3'processing machinery
L Liu, AM Yu, X Wang, LV Soles, Y Chen, Y Yoon, KSK Sarkan, ...
bioRxiv, 2023.04. 11.536453, 2023
NAR Breakthrough Article Cotranscriptional RNA strand exchange underlies the
L Cheng, EN White, NL Brandt, AM Yu, AA Chen, JB Lucks
Nucleic Acids Research 50 (21), 12001-12018, 2022
Computationally Reconstructing RNA Folding Pathways from Experimental Data
MY Angela
Weill Medical College of Cornell University, 2020
Predicting Drug Interactions and Mutagenicity with Ensemble Classifiers on Subgraphs of Molecules
A Schaumberg, A Yu, T Koshi, X Zong, S Rayadhurgam
arXiv preprint arXiv:1601.07233, 2016
Oxfold II: Project Report
S Game, M Golden, MY Angela
The system can't perform the operation now. Try again later.
Articles 1–18