Angela M Yu
Angela M Yu
Verified email at uw.edu
Title
Cited by
Cited by
Year
The SLE transcriptome exhibits evidence of chronic endotoxin exposure and has widespread dysregulation of non-coding and coding RNAs
L Shi, Z Zhang, MY Angela, W Wang, Z Wei, E Akhter, K Maurer, PC Reis, ...
PloS one 9 (5), e93846, 2014
1022014
Cotranscriptional folding of a riboswitch at nucleotide resolution
KE Watters, EJ Strobel, MY Angela, JT Lis, JB Lucks
Nature structural & molecular biology 23 (12), 1124, 2016
992016
High-throughput determination of RNA structures
EJ Strobel, MY Angela, JB Lucks
Nature Reviews Genetics 19 (10), 615-634, 2018
832018
Characterizing RNA structures in vitro and in vivo with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)
KE Watters, MY Angela, EJ Strobel, AH Settle, JB Lucks
Methods 103, 34-48, 2016
662016
Nanopore sequencing in microgravity
ABR McIntyre, L Rizzardi, MY Angela, N Alexander, GL Rosen, DJ Botkin, ...
npj Microgravity 2 (1), 1-9, 2016
512016
SnapShot: RNA structure probing technologies
PD Carlson, ME Evans, MY Angela, EJ Strobel, JB Lucks
Cell 175 (2), 600-600. e1, 2018
82018
Computationally reconstructing cotranscriptional RNA folding pathways from experimental data reveals rearrangement of non-native folding intermediates
MY Angela, PM Gasper, EJ Strobel, KE Watters, AA Chen, JB Lucks
bioRxiv, 379222, 2018
72018
Estimating RNA structure chemical probing reactivities from reverse transcriptase stops and mutations
MY Angela, ME Evans, JB Lucks
BioRxiv, 292532, 2018
72018
Computationally reconstructing cotranscriptional RNA folding from experimental data reveals rearrangement of non-native folding intermediates
MY Angela, PM Gasper, L Cheng, LB Lai, S Kaur, V Gopalan, AA Chen, ...
Molecular cell 81 (4), 870-883. e10, 2021
52021
Tracking RNA structures as RNAs transit through the cell
MY Angela, JB Lucks
Nature structural & molecular biology 26 (4), 256-257, 2019
22019
Efficient digest of high-throughput sequencing data in a reproducible report
Z Zhang, J Leipzig, A Sasson, MY Angela, JC Perin, HM Xie, M Sarmady, ...
BMC bioinformatics 14 (11), 1-10, 2013
22013
DUETT quantitatively identifies known and novel events in nascent RNA structural dynamics from chemical probing data
AY Xue, AM Yu, JB Lucks, N Bagheri
Bioinformatics 35 (24), 5103-5112, 2019
12019
Predicting Drug Interactions and Mutagenicity with Ensemble Classifiers on Subgraphs of Molecules
A Schaumberg, A Yu, T Koshi, X Zong, S Rayadhurgam
arXiv preprint arXiv:1601.07233, 2016
2016
Oxfold II: Project Report
S Game, M Golden, MY Angela
2013
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Articles 1–14