|QTL‐seq: Rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations|
H Takagi, A Abe, K Yoshida, S Kosugi, S Natsume, C Mitsuoka, A Uemura, ...
The Plant Journal 74 (1), 174-183, 2013
|The Capsella rubella genome and the genomic consequences of rapid mating system evolution|
T Slotte, KM Hazzouri, JA Ågren, D Koenig, F Maumus, YL Guo, K Steige, ...
Nature Genetics 45 (7), 831-835, 2013
|Body-methylated genes in Arabidopsis thaliana are functionally important and evolve slowly|
S Takuno, BS Gaut
Molecular biology and evolution 29 (1), 219-227, 2012
|Gene body methylation is conserved between plant orthologs and is of evolutionary consequence|
S Takuno, BS Gaut
Proceedings of the National Academy of Sciences 110 (5), 1797-1802, 2013
|Artificial selection for a green revolution gene during japonica rice domestication|
K Asano, M Yamasaki, S Takuno, K Miura, S Katagiri, T Ito, K Doi, J Wu, ...
Proceedings of the National Academy of Sciences 108 (27), 11034-11039, 2011
|The patterns and causes of variation in plant nucleotide substitution rates|
B Gaut, L Yang, S Takuno, LE Eguiarte
Annual Review of Ecology, Evolution and Systematics 42, 245-266, 2011
|Evolutionary patterns of genic DNA methylation vary across land plants|
S Takuno, JH Ran, BS Gaut
Nature Plants 2 (2), 1-7, 2016
|From Many, One: Genetic Control of Prolificacy during Maize Domestication|
DM Wills, C Whipple, S Takuno, LE Kursel, LM Shannon, J Ross-Ibarra, ...
PLoS Genetics 9 (6), e1003604, 2013
|Epigenetic regulation of intragenic transposable elements impacts gene transcription in Arabidopsis thaliana|
TN Le, Y Miyazaki, S Takuno, H Saze
Nucleic acids research 43 (8), 3911-3921, 2015
|Independent molecular basis of convergent highland adaptation in maize|
S Takuno, P Ralph, K Swarts, RJ Elshire, JC Glaubitz, ES Buckler, ...
Genetics 200 (4), 1297-1312, 2015
|Lowly Expressed Genes in Arabidopsis thaliana Bear the Signature of Possible Pseudogenization by Promoter Degradation|
L Yang, S Takuno, ER Waters, BS Gaut
Molecular biology and evolution 28 (3), 1193-1203, 2011
|Phylogenetic relationships among cultivated types of Brassica rapa L. em. Metzg. as revealed by AFLP analysis|
S Takuno, T Kawahara, O Ohnishi
Genetic resources and crop evolution 54 (2), 279-285, 2007
|Population Genomics in Bacteria: A Case Study of Staphylococcus aureus|
S Takuno, T Kado, RP Sugino, L Nakhleh, H Innan
Molecular biology and evolution 29 (2), 797-809, 2012
|Preservation of a pseudogene by gene conversion and diversifying selection|
S Takuno, T Nishio, Y Satta, H Innan
Genetics 180 (1), 517-531, 2008
|Effects of recombination on hitchhiking diversity in the Brassica self-incompatibility locus complex|
S Takuno, R Fujimoto, T Sugimura, K Sato, S Okamoto, SL Zhang, ...
Genetics 177 (2), 949-958, 2007
|Population genomics of the fission yeast Schizosaccharomyces pombe|
JA Fawcett, T Iida, S Takuno, RP Sugino, T Kado, K Kugou, S Mura, ...
PLoS One 9 (8), e104241, 2014
|The power of QTL mapping with RILs|
S Takuno, R Terauchi, H Innan
PloS one 7 (10), e46545, 2012
|Identical sets of methylated and nonmethylated genes in Ciona intestinalis sperm and muscle cells|
MM Suzuki, A Yoshinari, M Obara, S Takuno, S Shigenobu, Y Sasakura, ...
Epigenetics & chromatin 6 (1), 38, 2013
|CG Methylation Covaries with Differential Gene Expression between Leaf and Floral Bud Tissues of Brachypodium distachyon|
K Roessler, S Takuno, BS Gaut
PLoS One 11 (3), e0150002, 2016
|Recent retrotransposon insertions are methylated and phylogenetically clustered in japonica rice (Oryza sativa spp. japonica)|
BM vonHoldt, S Takuno, BS Gaut
Molecular Biology and Evolution 29 (10), 3193-3203, 2012