Alexis Battle
Alexis Battle
Associate Professor, Biomedical Engineering, Johns Hopkins University
Verified email at cs.jhu.edu - Homepage
Title
Cited by
Cited by
Year
The genotype-tissue expression (GTEx) project
J Lonsdale, J Thomas, M Salvatore, R Phillips, E Lo, S Shad, R Hasz, ...
Nature genetics 45 (6), 580-585, 2013
33792013
Efficient sparse coding algorithms
H Lee, A Battle, R Raina, AY Ng
Advances in neural information processing systems, 801-808, 2007
29722007
The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
GTEx Consortium
Science 348 (6235), 648-660, 2015
26092015
Self-taught learning: transfer learning from unlabeled data
R Raina, A Battle, H Lee, B Packer, AY Ng
Proceedings of the 24th international conference on Machine learning, 759-766, 2007
16092007
Genetic effects on gene expression across human tissues
GTEx Consortium
Nature 550 (7675), 204-213, 2017
13042017
A community effort to assess and improve drug sensitivity prediction algorithms
JC Costello, LM Heiser, E Georgii, M Gönen, MP Menden, NJ Wang, ...
Nature biotechnology 32 (12), 1202-1212, 2014
4552014
Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals
A Battle, S Mostafavi, X Zhu, JB Potash, MM Weissman, C McCormick, ...
Genome research 24 (1), 14-24, 2014
4372014
Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus
W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ...
PLoS Genet 6 (2), e1000841, 2010
3872010
Impact of regulatory variation from RNA to protein
A Battle, Z Khan, SH Wang, A Mitrano, MJ Ford, JK Pritchard, Y Gilad
Science 347 (6222), 664-667, 2015
2962015
Dynamic landscape and regulation of RNA editing in mammals
MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ...
Nature 550 (7675), 249-254, 2017
2102017
Effect of predicted protein-truncating genetic variants on the human transcriptome
MA Rivas, M Pirinen, DF Conrad, M Lek, EK Tsang, KJ Karczewski, ...
Science 348 (6235), 666-669, 2015
1822015
The jabberwocky programming environment for structured social computing
S Ahmad, A Battle, Z Malkani, S Kamvar
Proceedings of the 24th annual ACM symposium on User interface software and …, 2011
1612011
Ranking documents based on user behavior and/or feature data
JA Dean, C Anderson, A Battle
US Patent 7,716,225, 2010
1402010
Decomposing gene expression into cellular processes
E Segal, A Battle, D Koller
Biocomputing 2003, 89-100, 2002
1362002
The impact of rare variation on gene expression across tissues
X Li, Y Kim, EK Tsang, JR Davis, FN Damani, C Chiang, GT Hess, ...
Nature 550 (7675), 239-243, 2017
1302017
The impact of structural variation on human gene expression
C Chiang, AJ Scott, JR Davis, EK Tsang, X Li, Y Kim, T Hadzic, ...
Nature genetics 49 (5), 692-699, 2017
1292017
Query revision using known highly-ranked queries
DR Bailey, AJ Battle, DA Cohn, B Engelhardt, PP Nayak
US Patent 7,870,147, 2011
1282011
Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases
J Yang, T Huang, F Petralia, Q Long, B Zhang, C Argmann, Y Zhao, ...
Scientific reports 5 (1), 1-16, 2015
1202015
Type I interferon signaling genes in recurrent major depression: increased expression detected by whole-blood RNA sequencing
S Mostafavi, A Battle, X Zhu, JB Potash, MM Weissman, J Shi, K Beckman, ...
Molecular psychiatry 19 (12), 1267-1274, 2014
1132014
Estimating confidence for query revision models
DR Bailey, AJ Battle, BA Gomes, PP Nayak
US Patent 7,617,205, 2009
1132009
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