| Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019 | 18799 | 2019 |
| Discovery and inhibition of an interspecies gut bacterial pathway for Levodopa metabolism V Maini Rekdal, EN Bess, JE Bisanz, PJ Turnbaugh, EP Balskus Science 364 (6445), eaau6323, 2019 | 679 | 2019 |
| Bile acids and the gut microbiota: metabolic interactions and impacts on disease SL Collins, JG Stine, JE Bisanz, CD Okafor, AD Patterson Nature Reviews Microbiology 21 (4), 236-247, 2023 | 489 | 2023 |
| Assessment of variation in microbial community amplicon sequencing by the Microbiome Quality Control (MBQC) project consortium OWCH Rashmi Sinha, Galeb Abu-Ali, Emily Vogtmann, Anthony A Fodor, Boyu Ren ... Nature Biotechnology, doi:10.1038/nbt.3981, 2017 | 484* | 2017 |
| Human gut bacteria produce ΤΗ17-modulating bile acid metabolites D Paik, L Yao, Y Zhang, S Bae, GD D’Agostino, M Zhang, E Kim, ... Nature 603 (7903), 907-912, 2022 | 390 | 2022 |
| qiime2R: Importing QIIME2 artifacts and associated data into R sessions JE Bisanz Version 0.99 13, 2018 | 361 | 2018 |
| Meta-analysis reveals reproducible gut microbiome alterations in response to a high-fat diet JE Bisanz, V Upadhyay, JA Turnbaugh, K Ly, PJ Turnbaugh Cell host & microbe 26 (2), 265-272. e4, 2019 | 322 | 2019 |
| Reporting guidelines for human microbiome research: the STORMS checklist C Mirzayi, A Renson, Genomic Standards Consortium, ... Nature medicine 27 (11), 1885-1892, 2021 | 290 | 2021 |
| Vaginal microbiome and epithelial gene array in post-menopausal women with moderate to severe dryness R Hummelen, JM Macklaim, JE Bisanz, JA Hammond, A McMillan, ... PloS one 6 (11), e26602, 2011 | 231 | 2011 |
| QIIME 2: reproducible, interactive, scalable, and extensible microbiome data science. PeerJ E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ... Inc 6, e27295v2, 2018 | 208 | 2018 |
| Randomized open-label pilot study of the influence of probiotics and the gut microbiome on toxic metal levels in Tanzanian pregnant women and school children JE Bisanz, MK Enos, JR Mwanga, J Changalucha, JP Burton, GB Gloor, ... MBio 5 (5), 10.1128/mbio. 01580-14, 2014 | 193 | 2014 |
| Caloric restriction disrupts the microbiota and colonization resistance RJ von Schwartzenberg, JE Bisanz, S Lyalina, P Spanogiannopoulos, ... Nature 595 (7866), 272-277, 2021 | 186 | 2021 |
| Long-term irritable bowel syndrome symptom control with reintroduction of selected FODMAPs RM Harvie, AW Chisholm, JE Bisanz, JP Burton, P Herbison, K Schultz, ... World journal of gastroenterology 23 (25), 4632, 2017 | 184 | 2017 |
| Gut microbiota–specific IgA+ B cells traffic to the CNS in active multiple sclerosis AK Pröbstel, X Zhou, R Baumann, S Wischnewski, M Kutza, OL Rojas, ... Science immunology 5 (53), eabc7191, 2020 | 183 | 2020 |
| Cooking shapes the structure and function of the gut microbiome RN Carmody, JE Bisanz, BP Bowen, CF Maurice, S Lyalina, KB Louie, ... Nature microbiology 4 (12), 2052-2063, 2019 | 158 | 2019 |
| A multi-platform metabolomics approach identifies highly specific biomarkers of bacterial diversity in the vagina of pregnant and non-pregnant women A McMillan, S Rulisa, M Sumarah, JM Macklaim, J Renaud, JE Bisanz, ... Scientific reports 5 (1), 14174, 2015 | 143 | 2015 |
| Discovery and characterization of a prevalent human gut bacterial enzyme sufficient for the inactivation of a family of plant toxins N Koppel, JE Bisanz, ME Pandelia, PJ Turnbaugh, EP Balskus Elife 7, e33953, 2018 | 127 | 2018 |
| Phage-delivered CRISPR-Cas9 for strain-specific depletion and genomic deletions in the gut microbiome KN Lam, P Spanogiannopoulos, P Soto-Perez, M Alexander, MJ Nalley, ... Cell Reports 37 (5), 2021 | 125 | 2021 |
| Microbiota at multiple body sites during pregnancy in a rural Tanzanian population and effects of Moringa-supplemented probiotic yogurt JE Bisanz, MK Enos, G PrayGod, S Seney, JM Macklaim, S Chilton, ... Applied and environmental microbiology 81 (15), 4965-4975, 2015 | 120 | 2015 |
| Immobilization of cadmium and lead by Lactobacillus rhamnosus GR-1 mitigates apical-to-basolateral heavy metal translocation in a Caco-2 model of the intestinal … BA Daisley, M Monachese, M Trinder, JE Bisanz, JA Chmiel, JP Burton, ... Gut microbes 10 (3), 321-333, 2019 | 116 | 2019 |
Peter TurnbaughUniversity of California, San FranciscoVerified email at ucsf.edu
