Gene W. Tyson
Gene W. Tyson
Professor, Australian Centre for Ecogenomics, The
Verified email at uq.edu.au - Homepage
TitleCited byYear
Community structure and metabolism through reconstruction of microbial genomes from the environment
GW Tyson, J Chapman, P Hugenholtz, EE Allen, RJ Ram, PM Richardson, ...
Nature 428 (6978), 37, 2004
22532004
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
DH Parks, M Imelfort, CT Skennerton, P Hugenholtz, GW Tyson
Genome research 25 (7), 1043-1055, 2015
15542015
STAMP: statistical analysis of taxonomic and functional profiles
DH Parks, GW Tyson, P Hugenholtz, RG Beiko
Bioinformatics 30 (21), 3123-3124, 2014
10462014
Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes
M Albertsen, P Hugenholtz, A Skarshewski, KL Nielsen, GW Tyson, ...
Nature biotechnology 31 (6), 533, 2013
8322013
Microbial community gene expression in ocean surface waters
J Frias-Lopez, Y Shi, GW Tyson, ML Coleman, SC Schuster, ...
Proceedings of the National Academy of Sciences 105 (10), 3805-3810, 2008
7542008
Community proteomics of a natural microbial biofilm
RJ Ram, NC VerBerkmoes, MP Thelen, GW Tyson, BJ Baker, RC Blake, ...
Science 308 (5730), 1915-1920, 2005
7052005
Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage
MF Haroon, S Hu, Y Shi, M Imelfort, J Keller, P Hugenholtz, Z Yuan, ...
Nature 500 (7464), 567, 2013
6042013
Microbiology: metagenomics
P Hugenholtz, GW Tyson
Nature 455 (7212), 481, 2008
3652008
Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
DH Parks, C Rinke, M Chuvochina, PA Chaumeil, BJ Woodcroft, ...
Nature microbiology 2 (11), 1533, 2017
3402017
Investigation of candidate division TM7, a recently recognized major lineage of the domain Bacteria with no known pure-culture representatives
P Hugenholtz, GW Tyson, RI Webb, AM Wagner, LL Blackall
Appl. Environ. Microbiol. 67 (1), 411-419, 2001
3372001
Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics
PN Evans, DH Parks, GL Chadwick, SJ Robbins, VJ Orphan, SD Golding, ...
Science 350 (6259), 434-438, 2015
3332015
Fast, accurate error-correction of amplicon pyrosequences using Acacia
L Bragg, G Stone, M Imelfort, P Hugenholtz, GW Tyson
Nature methods 9 (5), 425, 2012
3172012
Rapidly evolving CRISPRs implicated in acquired resistance of microorganisms to viruses
GW Tyson, JF Banfield
Environmental microbiology 10 (1), 200-207, 2008
3082008
Shining a light on dark sequencing: characterising errors in Ion Torrent PGM data
LM Bragg, G Stone, MK Butler, P Hugenholtz, GW Tyson
PLoS computational biology 9 (4), e1003031, 2013
2942013
Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removalc
L Björnsson, P Hugenholtz, GW Tyson, LL Blackall
Microbiology 148 (8), 2309-2318, 2002
2702002
Metatranscriptomics reveals unique microbial small RNAs in the ocean’s water column
Y Shi, GW Tyson, EF DeLong
Nature 459 (7244), 266, 2009
2602009
Linking microbial community structure, interactions and function in anaerobic digesters using new molecular techniques
I Vanwonterghem, PD Jensen, DP Ho, DJ Batstone, GW Tyson
Current opinion in biotechnology 27, 55-64, 2014
2452014
Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria
I Lo, VJ Denef, NC VerBerkmoes, MB Shah, D Goltsman, G DiBartolo, ...
Nature 446 (7135), 537, 2007
2392007
Genome-directed isolation of the key nitrogen fixer Leptospirillum ferrodiazotrophum sp. nov. from an acidophilic microbial community
GW Tyson, I Lo, BJ Baker, EE Allen, P Hugenholtz, JF Banfield
Appl. Environ. Microbiol. 71 (10), 6319-6324, 2005
2392005
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ...
Nature biotechnology 35 (8), 725, 2017
2202017
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