| Systems biology based metabolic engineering for non-natural chemicals A Biz, S Proulx, Z Xu, K Siddartha, AM Indrayanti, R Mahadevan Biotechnology advances 37 (6), 107379, 2019 | 56 | 2019 |
| Enzyme activity prediction of sequence variants on novel substrates using improved substrate encodings and convolutional pooling Z Xu, J Wu, YS Song, R Mahadevan Machine Learning in Computational Biology, 78-87, 2022 | 7 | 2022 |
| Advances in generative modeling methods and datasets to design novel enzymes for renewable chemicals and fuels RA Barghout, Z Xu, S Betala, R Mahadevan Current Opinion in Biotechnology 84, 103007, 2023 | 3 | 2023 |
| Efficient Enumeration of Branched Novel Biochemical Pathways Using a Probabilistic Technique Z Xu, R Mahadevan Industrial & Engineering Chemistry Research 61 (25), 8645-8657, 2022 | 1 | 2022 |
| Enhancing Compound-Protein Interaction Prediction with Confidence Assessment RA Barghout, Z Xu, LC Serrano, R Mahadevan 2024 AIChE Annual Meeting, 2024 | | 2024 |
| Deep Learning-Based Protein Sequence-to-Function Prediction Framework Z Xu, RA Barghout, R Mahadevan Metabolic Engineering 15, 2023 | | 2023 |
| Efficient Enumeration of Branched Novel Biochemical Pathways in the Complex Biochemical System Z Xu University of Toronto (Canada), 2019 | | 2019 |
| Efficient Biochemical Pathway Prediction Using Simulated Annealing Z Xu, R Mahadevan IFAC-PapersOnLine 51 (19), 56-57, 2018 | | 2018 |
